Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
PCPG rs2977773 chr8:6732650 G/A 7.25E-6 177 13.27 18.7 27.33 KM Plot
PCPG rs2977785 chr8:6726693 C/T 6.48E-10 176 27.3 18.7 8.2 KM Plot
PCPG rs2977786 chr8:6726569 C/G 8.35E-7 177 27.33 19.3 8.2 KM Plot
PCPG rs2978864 chr8:6733720 T/C 1.34E-6 172 10.73 19 27.3 KM Plot
PCPG rs2978865 chr8:6732888 G/C 7.25E-6 177 27.33 18.7 13.27 KM Plot
PCPG rs2978866 chr8:6732330 C/T 7.25E-6 177 13.27 18.7 27.33 KM Plot
PCPG rs2978867 chr8:6732246 G/A 7.25E-6 177 13.27 18.7 27.33 KM Plot
PCPG rs2978868 chr8:6731808 G/T 6.54E-6 178 13.27 19 27.33 KM Plot
PCPG rs2980923 chr8:6733057 A/G 7.25E-6 177 13.27 18.7 27.33 KM Plot
PCPG rs2980924 chr8:6731993 A/G 7.25E-6 177 13.27 18.7 27.33 KM Plot
PCPG rs2980932 chr8:6726012 A/G 4.85E-10 178 27.27 18.45 8.2 KM Plot
PCPG rs2997189 chr13:37641814 G/C 0.000386 174 4.17 24.23 25.92 KM Plot
PCPG rs2997190 chr13:37641876 T/C 0.000355 176 4.17 24.23 25.92 KM Plot
PCPG rs2997987 chr13:114152184 T/C 4.5E-12 177 24.17 29.57 3.32 KM Plot
PCPG rs2997988 chr13:114152245 C/T 4.5E-12 177 24.17 29.57 3.32 KM Plot